Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tsen54Q8C2A2 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tsen54Q8C2A2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tsen54Q8C2A2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tsen54Q8C2A2 Scarna2-201ENSMUST00000157560 414 ntBASIC17.41■□□□□ 0.38
Tsen54Q8C2A2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.41■□□□□ 0.38
Tsen54Q8C2A2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tsen54Q8C2A2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tsen54Q8C2A2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tsen54Q8C2A2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tsen54Q8C2A2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tsen54Q8C2A2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tsen54Q8C2A2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Tsen54Q8C2A2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Gm9806-201ENSMUST00000051080 552 ntBASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tsen54Q8C2A2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Gm11175-201ENSMUST00000116172 543 ntBASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tsen54Q8C2A2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Gm11687-201ENSMUST00000118911 886 ntBASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tsen54Q8C2A2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Mir6538-201ENSMUST00000183713 110 ntBASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms