Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.6■□□□□ 0.73
Vps9d1Q8C190 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps9d1Q8C190 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps9d1Q8C190 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps9d1Q8C190 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps9d1Q8C190 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.58■□□□□ 0.73
Vps9d1Q8C190 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps9d1Q8C190 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps9d1Q8C190 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps9d1Q8C190 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps9d1Q8C190 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Gm7332-201ENSMUST00000118351 454 ntBASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps9d1Q8C190 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vps9d1Q8C190 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Vps9d1Q8C190 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.52■□□□□ 0.72
Vps9d1Q8C190 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps9d1Q8C190 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps9d1Q8C190 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Gm14523-201ENSMUST00000117260 558 ntBASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps9d1Q8C190 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps9d1Q8C190 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps9d1Q8C190 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms