Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.33■■□□□ 1
Slc43a1Q8BSM7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.32■■□□□ 1
Slc43a1Q8BSM7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Slc43a1Q8BSM7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc43a1Q8BSM7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.31■■□□□ 1
Slc43a1Q8BSM7 Gm12821-201ENSMUST00000120022 600 ntBASIC21.31■■□□□ 1
Slc43a1Q8BSM7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc43a1Q8BSM7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc43a1Q8BSM7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.3■■□□□ 1
Slc43a1Q8BSM7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc43a1Q8BSM7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.3■■□□□ 1
Slc43a1Q8BSM7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc43a1Q8BSM7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc43a1Q8BSM7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc43a1Q8BSM7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc43a1Q8BSM7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.27■■□□□ 1
Slc43a1Q8BSM7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.27■■□□□ 1
Slc43a1Q8BSM7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc43a1Q8BSM7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc43a1Q8BSM7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc43a1Q8BSM7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Slc43a1Q8BSM7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc43a1Q8BSM7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc43a1Q8BSM7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc43a1Q8BSM7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc43a1Q8BSM7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Slc43a1Q8BSM7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc43a1Q8BSM7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc43a1Q8BSM7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc43a1Q8BSM7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc43a1Q8BSM7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc43a1Q8BSM7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Slc43a1Q8BSM7 Gm27454-201ENSMUST00000185090 204 ntBASIC21.19■□□□□ 0.98
Slc43a1Q8BSM7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc43a1Q8BSM7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc43a1Q8BSM7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Slc43a1Q8BSM7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc43a1Q8BSM7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms