Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip4Q8BQP8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip4Q8BQP8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip4Q8BQP8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 Etf1-202ENSMUST00000180351 108 ntBASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip4Q8BQP8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip4Q8BQP8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip4Q8BQP8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Rab11fip4Q8BQP8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Rab11fip4Q8BQP8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip4Q8BQP8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip4Q8BQP8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip4Q8BQP8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip4Q8BQP8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab11fip4Q8BQP8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rab11fip4Q8BQP8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rab11fip4Q8BQP8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rab11fip4Q8BQP8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.14■■□□□ 1.29
Rab11fip4Q8BQP8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rab11fip4Q8BQP8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rab11fip4Q8BQP8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.13■■□□□ 1.29
Rab11fip4Q8BQP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab11fip4Q8BQP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rab11fip4Q8BQP8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rab11fip4Q8BQP8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rab11fip4Q8BQP8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rab11fip4Q8BQP8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.1■■□□□ 1.29
Rab11fip4Q8BQP8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Rab11fip4Q8BQP8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Rab11fip4Q8BQP8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab11fip4Q8BQP8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab11fip4Q8BQP8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms