Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Gm6821-201ENSMUST00000107540 542 ntBASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco3Q8BQM7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.23■□□□□ 0.35
Smco3Q8BQM7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.23■□□□□ 0.35
Smco3Q8BQM7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco3Q8BQM7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco3Q8BQM7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Smco3Q8BQM7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Smco3Q8BQM7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.2■□□□□ 0.34
Smco3Q8BQM7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.19■□□□□ 0.34
Smco3Q8BQM7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.18■□□□□ 0.34
Smco3Q8BQM7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smco3Q8BQM7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Gm9812-201ENSMUST00000061934 968 ntBASIC17.17■□□□□ 0.34
Smco3Q8BQM7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco3Q8BQM7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 248.1 ms