Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.3■■□□□ 1
Sfr1Q8BP27 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sfr1Q8BP27 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.29■■□□□ 1
Sfr1Q8BP27 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.29■■□□□ 1
Sfr1Q8BP27 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sfr1Q8BP27 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sfr1Q8BP27 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sfr1Q8BP27 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.28■■□□□ 1
Sfr1Q8BP27 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.28■■□□□ 1
Sfr1Q8BP27 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.28■■□□□ 1
Sfr1Q8BP27 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.28■■□□□ 1
Sfr1Q8BP27 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sfr1Q8BP27 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sfr1Q8BP27 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sfr1Q8BP27 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.27■■□□□ 1
Sfr1Q8BP27 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sfr1Q8BP27 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sfr1Q8BP27 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sfr1Q8BP27 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sfr1Q8BP27 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.27■■□□□ 1
Sfr1Q8BP27 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Sfr1Q8BP27 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
Sfr1Q8BP27 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sfr1Q8BP27 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sfr1Q8BP27 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sfr1Q8BP27 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.23■□□□□ 0.99
Sfr1Q8BP27 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sfr1Q8BP27 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Gm10399-202ENSMUST00000202768 748 ntBASIC21.22■□□□□ 0.99
Sfr1Q8BP27 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sfr1Q8BP27 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sfr1Q8BP27 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms