Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col16a1Q8BLX7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col16a1Q8BLX7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC28.37■■■□□ 2.13
Col16a1Q8BLX7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Col16a1Q8BLX7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col16a1Q8BLX7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col16a1Q8BLX7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC28.36■■■□□ 2.13
Col16a1Q8BLX7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
Col16a1Q8BLX7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Col16a1Q8BLX7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC28.35■■■□□ 2.13
Col16a1Q8BLX7 Gm21168-201ENSMUST00000199646 1096 ntBASIC28.34■■■□□ 2.13
Col16a1Q8BLX7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col16a1Q8BLX7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col16a1Q8BLX7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Col16a1Q8BLX7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC28.33■■■□□ 2.13
Col16a1Q8BLX7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Col16a1Q8BLX7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Col16a1Q8BLX7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
Col16a1Q8BLX7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Col16a1Q8BLX7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Col16a1Q8BLX7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Col16a1Q8BLX7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC28.33■■■□□ 2.12
Col16a1Q8BLX7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col16a1Q8BLX7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col16a1Q8BLX7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col16a1Q8BLX7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
Col16a1Q8BLX7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Col16a1Q8BLX7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC28.31■■■□□ 2.12
Col16a1Q8BLX7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Col16a1Q8BLX7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Col16a1Q8BLX7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Col16a1Q8BLX7 Gm43017-201ENSMUST00000198296 752 ntBASIC28.3■■■□□ 2.12
Col16a1Q8BLX7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Col16a1Q8BLX7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Col16a1Q8BLX7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col16a1Q8BLX7 Gm29257-201ENSMUST00000186115 639 ntBASIC28.28■■■□□ 2.12
Col16a1Q8BLX7 Gm43137-201ENSMUST00000198052 594 ntBASIC28.28■■■□□ 2.12
Col16a1Q8BLX7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Col16a1Q8BLX7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Col16a1Q8BLX7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Col16a1Q8BLX7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col16a1Q8BLX7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col16a1Q8BLX7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Col16a1Q8BLX7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC28.27■■■□□ 2.12
Col16a1Q8BLX7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC28.26■■■□□ 2.12
Col16a1Q8BLX7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC28.26■■■□□ 2.11
Col16a1Q8BLX7 AC164629.5-201ENSMUST00000220387 632 ntBASIC28.26■■■□□ 2.11
Col16a1Q8BLX7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col16a1Q8BLX7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Gm9870-201ENSMUST00000063874 645 ntBASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col16a1Q8BLX7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col16a1Q8BLX7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col16a1Q8BLX7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col16a1Q8BLX7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Col16a1Q8BLX7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC28.22■■■□□ 2.11
Col16a1Q8BLX7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col16a1Q8BLX7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC28.22■■■□□ 2.11
Col16a1Q8BLX7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col16a1Q8BLX7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Col16a1Q8BLX7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC28.21■■■□□ 2.11
Col16a1Q8BLX7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC28.21■■■□□ 2.11
Col16a1Q8BLX7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC28.21■■■□□ 2.11
Col16a1Q8BLX7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col16a1Q8BLX7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Col16a1Q8BLX7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Col16a1Q8BLX7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
Col16a1Q8BLX7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Col16a1Q8BLX7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
Col16a1Q8BLX7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms