Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Chmp2bQ8BJF9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp2bQ8BJF9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.44■■□□□ 1.02
Chmp2bQ8BJF9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
Chmp2bQ8BJF9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp2bQ8BJF9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp2bQ8BJF9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.4■■□□□ 1.02
Chmp2bQ8BJF9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chmp2bQ8BJF9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.39■■□□□ 1.02
Chmp2bQ8BJF9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp2bQ8BJF9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp2bQ8BJF9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Gm11175-201ENSMUST00000116172 543 ntBASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chmp2bQ8BJF9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chmp2bQ8BJF9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Chmp2bQ8BJF9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.34■■□□□ 1.01
Chmp2bQ8BJF9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp2bQ8BJF9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Chmp2bQ8BJF9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp2bQ8BJF9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chmp2bQ8BJF9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms