Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab39aQ8BHD0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab39aQ8BHD0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rab39aQ8BHD0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Rab39aQ8BHD0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rab39aQ8BHD0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rab39aQ8BHD0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab39aQ8BHD0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab39aQ8BHD0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab39aQ8BHD0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab39aQ8BHD0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab39aQ8BHD0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rab39aQ8BHD0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
Rab39aQ8BHD0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab39aQ8BHD0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab39aQ8BHD0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab39aQ8BHD0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab39aQ8BHD0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab39aQ8BHD0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Rab39aQ8BHD0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.24■□□□□ 0.67
Rab39aQ8BHD0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab39aQ8BHD0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Gm14523-201ENSMUST00000117260 558 ntBASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab39aQ8BHD0 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Cap2-205ENSMUST00000225824 1634 ntBASIC19.22■□□□□ 0.67
Rab39aQ8BHD0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab39aQ8BHD0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Gm7332-201ENSMUST00000118351 454 ntBASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab39aQ8BHD0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab39aQ8BHD0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab39aQ8BHD0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab39aQ8BHD0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rab39aQ8BHD0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab39aQ8BHD0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.18■□□□□ 0.66
Rab39aQ8BHD0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab39aQ8BHD0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab39aQ8BHD0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab39aQ8BHD0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab39aQ8BHD0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab39aQ8BHD0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rab39aQ8BHD0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms