Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Samm50Q8BGH2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.54■■□□□ 1.52
Samm50Q8BGH2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
Samm50Q8BGH2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Samm50Q8BGH2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Samm50Q8BGH2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Samm50Q8BGH2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Samm50Q8BGH2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Samm50Q8BGH2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Samm50Q8BGH2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Samm50Q8BGH2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Samm50Q8BGH2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.5■■□□□ 1.51
Samm50Q8BGH2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Gm45444-201ENSMUST00000211394 898 ntBASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Samm50Q8BGH2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Samm50Q8BGH2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Samm50Q8BGH2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Samm50Q8BGH2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Samm50Q8BGH2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Samm50Q8BGH2 Gm13238-201ENSMUST00000117655 780 ntBASIC24.45■■□□□ 1.5
Samm50Q8BGH2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Samm50Q8BGH2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Samm50Q8BGH2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Samm50Q8BGH2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Samm50Q8BGH2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Gm43566-201ENSMUST00000196851 808 ntBASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Samm50Q8BGH2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 Gm5812-201ENSMUST00000061073 957 ntBASIC24.43■■□□□ 1.5
Samm50Q8BGH2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Samm50Q8BGH2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Samm50Q8BGH2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.42■■□□□ 1.5
Samm50Q8BGH2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.42■■□□□ 1.5
Samm50Q8BGH2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Samm50Q8BGH2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Samm50Q8BGH2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Samm50Q8BGH2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Samm50Q8BGH2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms