Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Limd2Q8BGB5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Limd2Q8BGB5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Limd2Q8BGB5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Limd2Q8BGB5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Gm8109-201ENSMUST00000194076 746 ntBASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Limd2Q8BGB5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Limd2Q8BGB5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Limd2Q8BGB5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Limd2Q8BGB5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Limd2Q8BGB5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Limd2Q8BGB5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Limd2Q8BGB5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC11.47□□□□□ -0.57
Limd2Q8BGB5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Limd2Q8BGB5 Particl-201ENSMUST00000205370 1560 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms