Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.13■□□□□ 0.97
Ddx42Q810A7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.13■□□□□ 0.97
Ddx42Q810A7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx42Q810A7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx42Q810A7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx42Q810A7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.12■□□□□ 0.97
Ddx42Q810A7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx42Q810A7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ddx42Q810A7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx42Q810A7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx42Q810A7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx42Q810A7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx42Q810A7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx42Q810A7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx42Q810A7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx42Q810A7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx42Q810A7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx42Q810A7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx42Q810A7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Ddx42Q810A7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx42Q810A7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx42Q810A7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.07■□□□□ 0.96
Ddx42Q810A7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx42Q810A7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx42Q810A7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx42Q810A7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx42Q810A7 Gm5812-201ENSMUST00000061073 957 ntBASIC21.07■□□□□ 0.96
Ddx42Q810A7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx42Q810A7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx42Q810A7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx42Q810A7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx42Q810A7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx42Q810A7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx42Q810A7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx42Q810A7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx42Q810A7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx42Q810A7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx42Q810A7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx42Q810A7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.03■□□□□ 0.96
Ddx42Q810A7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Ddx42Q810A7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx42Q810A7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.02■□□□□ 0.96
Ddx42Q810A7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx42Q810A7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.01■□□□□ 0.95
Ddx42Q810A7 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.01■□□□□ 0.95
Ddx42Q810A7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21■□□□□ 0.95
Ddx42Q810A7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx42Q810A7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21■□□□□ 0.95
Ddx42Q810A7 Gm43182-201ENSMUST00000199476 2528 ntBASIC21■□□□□ 0.95
Ddx42Q810A7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21■□□□□ 0.95
Ddx42Q810A7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx42Q810A7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx42Q810A7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.99■□□□□ 0.95
Ddx42Q810A7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.99■□□□□ 0.95
Ddx42Q810A7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx42Q810A7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms