Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3hc1Q80YV2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3hc1Q80YV2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3hc1Q80YV2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Zc3hc1Q80YV2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3hc1Q80YV2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zc3hc1Q80YV2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3hc1Q80YV2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3hc1Q80YV2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3hc1Q80YV2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zc3hc1Q80YV2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Zc3hc1Q80YV2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3hc1Q80YV2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zc3hc1Q80YV2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zc3hc1Q80YV2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.12■□□□□ 0.65
Zc3hc1Q80YV2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zc3hc1Q80YV2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zc3hc1Q80YV2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3hc1Q80YV2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Scarna2-201ENSMUST00000157560 414 ntBASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Gm9806-201ENSMUST00000051080 552 ntBASIC19.1■□□□□ 0.65
Zc3hc1Q80YV2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zc3hc1Q80YV2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms