Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm1aQ6ZQ88 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm1aQ6ZQ88 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm1aQ6ZQ88 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm1aQ6ZQ88 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kdm1aQ6ZQ88 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kdm1aQ6ZQ88 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Kdm1aQ6ZQ88 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kdm1aQ6ZQ88 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.24■■□□□ 1.31
Kdm1aQ6ZQ88 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kdm1aQ6ZQ88 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Kdm1aQ6ZQ88 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.24■■□□□ 1.31
Kdm1aQ6ZQ88 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kdm1aQ6ZQ88 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Cap2-205ENSMUST00000225824 1634 ntBASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kdm1aQ6ZQ88 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kdm1aQ6ZQ88 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kdm1aQ6ZQ88 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kdm1aQ6ZQ88 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kdm1aQ6ZQ88 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
Kdm1aQ6ZQ88 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kdm1aQ6ZQ88 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.19■■□□□ 1.3
Kdm1aQ6ZQ88 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kdm1aQ6ZQ88 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kdm1aQ6ZQ88 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Kdm1aQ6ZQ88 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kdm1aQ6ZQ88 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kdm1aQ6ZQ88 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.16■■□□□ 1.3
Kdm1aQ6ZQ88 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kdm1aQ6ZQ88 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kdm1aQ6ZQ88 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kdm1aQ6ZQ88 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Kdm1aQ6ZQ88 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.14■■□□□ 1.3
Kdm1aQ6ZQ88 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Kdm1aQ6ZQ88 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kdm1aQ6ZQ88 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kdm1aQ6ZQ88 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.29
Kdm1aQ6ZQ88 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Kdm1aQ6ZQ88 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms