Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhga7Q6DD96 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Gm12366-201ENSMUST00000121722 873 ntBASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Gm5786-201ENSMUST00000085368 882 ntBASIC20.33■□□□□ 0.85
Pcdhga7Q6DD96 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga7Q6DD96 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga7Q6DD96 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga7Q6DD96 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga7Q6DD96 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga7Q6DD96 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga7Q6DD96 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.32■□□□□ 0.84
Pcdhga7Q6DD96 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga7Q6DD96 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.32■□□□□ 0.84
Pcdhga7Q6DD96 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga7Q6DD96 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga7Q6DD96 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga7Q6DD96 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Mir6538-201ENSMUST00000183713 110 ntBASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga7Q6DD96 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga7Q6DD96 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga7Q6DD96 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga7Q6DD96 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga7Q6DD96 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga7Q6DD96 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhga7Q6DD96 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga7Q6DD96 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhga7Q6DD96 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms