Protein–RNA interactions for Protein: Q61574

Foxs1, Forkhead box protein S1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxs1Q61574 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Foxs1Q61574 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.33■□□□□ 0.85
Foxs1Q61574 Rps24-207ENSMUST00000224568 714 ntBASIC20.33■□□□□ 0.85
Foxs1Q61574 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxs1Q61574 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Foxs1Q61574 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Foxs1Q61574 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Foxs1Q61574 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Foxs1Q61574 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.32■□□□□ 0.84
Foxs1Q61574 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Foxs1Q61574 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Foxs1Q61574 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxs1Q61574 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxs1Q61574 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Foxs1Q61574 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Foxs1Q61574 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Foxs1Q61574 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxs1Q61574 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxs1Q61574 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxs1Q61574 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxs1Q61574 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxs1Q61574 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxs1Q61574 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Foxs1Q61574 Etf1-202ENSMUST00000180351 108 ntBASIC20.29■□□□□ 0.84
Foxs1Q61574 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxs1Q61574 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxs1Q61574 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.28■□□□□ 0.84
Foxs1Q61574 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxs1Q61574 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxs1Q61574 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxs1Q61574 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxs1Q61574 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxs1Q61574 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxs1Q61574 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxs1Q61574 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxs1Q61574 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxs1Q61574 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxs1Q61574 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxs1Q61574 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxs1Q61574 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Foxs1Q61574 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Foxs1Q61574 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxs1Q61574 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxs1Q61574 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxs1Q61574 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Foxs1Q61574 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxs1Q61574 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxs1Q61574 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.25■□□□□ 0.83
Foxs1Q61574 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.25■□□□□ 0.83
Foxs1Q61574 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxs1Q61574 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Foxs1Q61574 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxs1Q61574 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxs1Q61574 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxs1Q61574 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxs1Q61574 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxs1Q61574 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxs1Q61574 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxs1Q61574 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxs1Q61574 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxs1Q61574 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.22■□□□□ 0.83
Foxs1Q61574 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxs1Q61574 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.22■□□□□ 0.83
Foxs1Q61574 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxs1Q61574 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Foxs1Q61574 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Foxs1Q61574 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.21■□□□□ 0.83
Foxs1Q61574 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxs1Q61574 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxs1Q61574 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxs1Q61574 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Foxs1Q61574 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxs1Q61574 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxs1Q61574 Gm7417-201ENSMUST00000192950 473 ntBASIC20.2■□□□□ 0.82
Foxs1Q61574 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.2■□□□□ 0.82
Foxs1Q61574 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxs1Q61574 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxs1Q61574 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxs1Q61574 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.18■□□□□ 0.82
Foxs1Q61574 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.18■□□□□ 0.82
Foxs1Q61574 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxs1Q61574 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Foxs1Q61574 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Foxs1Q61574 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxs1Q61574 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms