Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxc1Q61572 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.27■□□□□ 0.04
Foxc1Q61572 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.27■□□□□ 0.04
Foxc1Q61572 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Foxc1Q61572 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxc1Q61572 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxc1Q61572 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.27■□□□□ 0.03
Foxc1Q61572 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Foxc1Q61572 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.26■□□□□ 0.03
Foxc1Q61572 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxc1Q61572 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxc1Q61572 Gm14117-201ENSMUST00000122417 843 ntBASIC15.25■□□□□ 0.03
Foxc1Q61572 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxc1Q61572 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.25■□□□□ 0.03
Foxc1Q61572 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxc1Q61572 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxc1Q61572 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.24■□□□□ 0.03
Foxc1Q61572 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.24■□□□□ 0.03
Foxc1Q61572 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxc1Q61572 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Foxc1Q61572 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Foxc1Q61572 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxc1Q61572 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxc1Q61572 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.22■□□□□ 0.03
Foxc1Q61572 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxc1Q61572 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxc1Q61572 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Foxc1Q61572 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Foxc1Q61572 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.21■□□□□ 0.03
Foxc1Q61572 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxc1Q61572 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxc1Q61572 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.21■□□□□ 0.02
Foxc1Q61572 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxc1Q61572 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxc1Q61572 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxc1Q61572 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxc1Q61572 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.2■□□□□ 0.02
Foxc1Q61572 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.2■□□□□ 0.02
Foxc1Q61572 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.2■□□□□ 0.02
Foxc1Q61572 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Gm10232-201ENSMUST00000089221 720 ntBASIC15.2■□□□□ 0.02
Foxc1Q61572 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.2■□□□□ 0.02
Foxc1Q61572 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxc1Q61572 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxc1Q61572 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms