Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.35■■□□□ 1.01
Sdf4Q61112 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.35■■□□□ 1.01
Sdf4Q61112 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sdf4Q61112 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf4Q61112 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sdf4Q61112 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sdf4Q61112 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sdf4Q61112 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sdf4Q61112 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sdf4Q61112 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.34■■□□□ 1.01
Sdf4Q61112 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sdf4Q61112 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
Sdf4Q61112 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf4Q61112 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Sdf4Q61112 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sdf4Q61112 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf4Q61112 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf4Q61112 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf4Q61112 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf4Q61112 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sdf4Q61112 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf4Q61112 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sdf4Q61112 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.31■■□□□ 1
Sdf4Q61112 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sdf4Q61112 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.31■■□□□ 1
Sdf4Q61112 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sdf4Q61112 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sdf4Q61112 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sdf4Q61112 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sdf4Q61112 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sdf4Q61112 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sdf4Q61112 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sdf4Q61112 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf4Q61112 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf4Q61112 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf4Q61112 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf4Q61112 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf4Q61112 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.28■■□□□ 1
Sdf4Q61112 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf4Q61112 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf4Q61112 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sdf4Q61112 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf4Q61112 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sdf4Q61112 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sdf4Q61112 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf4Q61112 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Sdf4Q61112 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf4Q61112 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Sdf4Q61112 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sdf4Q61112 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Sdf4Q61112 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.27■■□□□ 1
Sdf4Q61112 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sdf4Q61112 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.27■■□□□ 1
Sdf4Q61112 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sdf4Q61112 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sdf4Q61112 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sdf4Q61112 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.26■□□□□ 0.99
Sdf4Q61112 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf4Q61112 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf4Q61112 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf4Q61112 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf4Q61112 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf4Q61112 Gm10232-201ENSMUST00000089221 720 ntBASIC21.25■□□□□ 0.99
Sdf4Q61112 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sdf4Q61112 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sdf4Q61112 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.24■□□□□ 0.99
Sdf4Q61112 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdf4Q61112 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sdf4Q61112 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sdf4Q61112 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sdf4Q61112 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Sdf4Q61112 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf4Q61112 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf4Q61112 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Sdf4Q61112 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf4Q61112 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Sdf4Q61112 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sdf4Q61112 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf4Q61112 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf4Q61112 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sdf4Q61112 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms