Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxf1Q61080 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Foxf1Q61080 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.61■□□□□ 0.41
Foxf1Q61080 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Foxf1Q61080 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.61■□□□□ 0.41
Foxf1Q61080 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxf1Q61080 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.6■□□□□ 0.41
Foxf1Q61080 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.6■□□□□ 0.41
Foxf1Q61080 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Foxf1Q61080 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.6■□□□□ 0.41
Foxf1Q61080 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.6■□□□□ 0.41
Foxf1Q61080 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxf1Q61080 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.59■□□□□ 0.41
Foxf1Q61080 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Foxf1Q61080 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.59■□□□□ 0.41
Foxf1Q61080 Gm5921-201ENSMUST00000075898 882 ntBASIC17.59■□□□□ 0.41
Foxf1Q61080 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Foxf1Q61080 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.58■□□□□ 0.41
Foxf1Q61080 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxf1Q61080 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxf1Q61080 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Foxf1Q61080 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxf1Q61080 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Foxf1Q61080 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxf1Q61080 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Foxf1Q61080 Gm45444-201ENSMUST00000211394 898 ntBASIC17.58■□□□□ 0.4
Foxf1Q61080 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.58■□□□□ 0.4
Foxf1Q61080 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.58■□□□□ 0.4
Foxf1Q61080 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Foxf1Q61080 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.57■□□□□ 0.4
Foxf1Q61080 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Foxf1Q61080 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Foxf1Q61080 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxf1Q61080 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.56■□□□□ 0.4
Foxf1Q61080 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Foxf1Q61080 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxf1Q61080 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Foxf1Q61080 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Foxf1Q61080 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Foxf1Q61080 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxf1Q61080 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Foxf1Q61080 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.54■□□□□ 0.4
Foxf1Q61080 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Foxf1Q61080 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Foxf1Q61080 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Foxf1Q61080 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxf1Q61080 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxf1Q61080 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms