Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Slc6a4Q60857 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a4Q60857 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a4Q60857 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a4Q60857 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a4Q60857 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a4Q60857 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Slc6a4Q60857 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a4Q60857 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a4Q60857 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a4Q60857 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a4Q60857 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a4Q60857 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Slc6a4Q60857 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a4Q60857 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc6a4Q60857 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a4Q60857 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a4Q60857 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a4Q60857 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Slc6a4Q60857 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a4Q60857 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a4Q60857 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Slc6a4Q60857 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a4Q60857 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a4Q60857 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc6a4Q60857 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a4Q60857 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a4Q60857 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a4Q60857 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.61■■□□□ 1.05
Slc6a4Q60857 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a4Q60857 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a4Q60857 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a4Q60857 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc6a4Q60857 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a4Q60857 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Slc6a4Q60857 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a4Q60857 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a4Q60857 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a4Q60857 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc6a4Q60857 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a4Q60857 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a4Q60857 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a4Q60857 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a4Q60857 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a4Q60857 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a4Q60857 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a4Q60857 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.58■■□□□ 1.05
Slc6a4Q60857 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a4Q60857 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a4Q60857 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Slc6a4Q60857 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a4Q60857 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.57■■□□□ 1.04
Slc6a4Q60857 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a4Q60857 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a4Q60857 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a4Q60857 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a4Q60857 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.55■■□□□ 1.04
Slc6a4Q60857 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Slc6a4Q60857 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a4Q60857 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a4Q60857 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a4Q60857 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a4Q60857 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a4Q60857 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms