Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Gm9959-201ENSMUST00000068277 390 ntBASIC20.11■□□□□ 0.81
Xrcc1Q60596 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xrcc1Q60596 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.1■□□□□ 0.81
Xrcc1Q60596 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xrcc1Q60596 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.09■□□□□ 0.81
Xrcc1Q60596 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xrcc1Q60596 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Xrcc1Q60596 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Xrcc1Q60596 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Xrcc1Q60596 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.08■□□□□ 0.81
Xrcc1Q60596 Gm10399-202ENSMUST00000202768 748 ntBASIC20.08■□□□□ 0.81
Xrcc1Q60596 Gm45102-201ENSMUST00000207427 857 ntBASIC20.08■□□□□ 0.81
Xrcc1Q60596 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Xrcc1Q60596 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Xrcc1Q60596 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Xrcc1Q60596 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Xrcc1Q60596 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Xrcc1Q60596 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Xrcc1Q60596 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Xrcc1Q60596 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Xrcc1Q60596 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.06■□□□□ 0.8
Xrcc1Q60596 Rps24-207ENSMUST00000224568 714 ntBASIC20.06■□□□□ 0.8
Xrcc1Q60596 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrcc1Q60596 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrcc1Q60596 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrcc1Q60596 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Xrcc1Q60596 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrcc1Q60596 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Xrcc1Q60596 Etf1-202ENSMUST00000180351 108 ntBASIC20.04■□□□□ 0.8
Xrcc1Q60596 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrcc1Q60596 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.04■□□□□ 0.8
Xrcc1Q60596 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Xrcc1Q60596 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.03■□□□□ 0.8
Xrcc1Q60596 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrcc1Q60596 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.02■□□□□ 0.8
Xrcc1Q60596 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Xrcc1Q60596 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Gm14117-201ENSMUST00000122417 843 ntBASIC20.02■□□□□ 0.8
Xrcc1Q60596 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Gm40881-201ENSMUST00000223397 166 ntBASIC20.02■□□□□ 0.8
Xrcc1Q60596 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Xrcc1Q60596 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Xrcc1Q60596 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Xrcc1Q60596 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.02■□□□□ 0.79
Xrcc1Q60596 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Xrcc1Q60596 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.01■□□□□ 0.79
Xrcc1Q60596 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.01■□□□□ 0.79
Xrcc1Q60596 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrcc1Q60596 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrcc1Q60596 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.01■□□□□ 0.79
Xrcc1Q60596 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrcc1Q60596 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Xrcc1Q60596 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Xrcc1Q60596 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Xrcc1Q60596 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Xrcc1Q60596 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Xrcc1Q60596 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Xrcc1Q60596 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.99■□□□□ 0.79
Xrcc1Q60596 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms