Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pabpn1lQ5XFR0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.93■□□□□ 0.94
Pabpn1lQ5XFR0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pabpn1lQ5XFR0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.93■□□□□ 0.94
Pabpn1lQ5XFR0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pabpn1lQ5XFR0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pabpn1lQ5XFR0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pabpn1lQ5XFR0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.92■□□□□ 0.94
Pabpn1lQ5XFR0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpn1lQ5XFR0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpn1lQ5XFR0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1lQ5XFR0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.89■□□□□ 0.94
Pabpn1lQ5XFR0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1lQ5XFR0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1lQ5XFR0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1lQ5XFR0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1lQ5XFR0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1lQ5XFR0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1lQ5XFR0 Gm11599-201ENSMUST00000118720 878 ntBASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1lQ5XFR0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pabpn1lQ5XFR0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.86■□□□□ 0.93
Pabpn1lQ5XFR0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.85■□□□□ 0.93
Pabpn1lQ5XFR0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pabpn1lQ5XFR0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Pabpn1lQ5XFR0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pabpn1lQ5XFR0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pabpn1lQ5XFR0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pabpn1lQ5XFR0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pabpn1lQ5XFR0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pabpn1lQ5XFR0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pabpn1lQ5XFR0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.82■□□□□ 0.92
Pabpn1lQ5XFR0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pabpn1lQ5XFR0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pabpn1lQ5XFR0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pabpn1lQ5XFR0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pabpn1lQ5XFR0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pabpn1lQ5XFR0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pabpn1lQ5XFR0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pabpn1lQ5XFR0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pabpn1lQ5XFR0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pabpn1lQ5XFR0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pabpn1lQ5XFR0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pabpn1lQ5XFR0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms