Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NotoQ5TIS6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NotoQ5TIS6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NotoQ5TIS6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.28■□□□□ 0.36
NotoQ5TIS6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NotoQ5TIS6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NotoQ5TIS6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NotoQ5TIS6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NotoQ5TIS6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
NotoQ5TIS6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
NotoQ5TIS6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NotoQ5TIS6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.27■□□□□ 0.36
NotoQ5TIS6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NotoQ5TIS6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NotoQ5TIS6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NotoQ5TIS6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NotoQ5TIS6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NotoQ5TIS6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NotoQ5TIS6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NotoQ5TIS6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NotoQ5TIS6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NotoQ5TIS6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NotoQ5TIS6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NotoQ5TIS6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NotoQ5TIS6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NotoQ5TIS6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NotoQ5TIS6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.22■□□□□ 0.35
NotoQ5TIS6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.22■□□□□ 0.35
NotoQ5TIS6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.22■□□□□ 0.35
NotoQ5TIS6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NotoQ5TIS6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NotoQ5TIS6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NotoQ5TIS6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NotoQ5TIS6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NotoQ5TIS6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NotoQ5TIS6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms