Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav8d-2Q5R1B6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav8d-2Q5R1B6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav8d-2Q5R1B6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav8d-2Q5R1B6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav8d-2Q5R1B6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trav8d-2Q5R1B6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8d-2Q5R1B6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8d-2Q5R1B6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8d-2Q5R1B6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trav8d-2Q5R1B6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Trav8d-2Q5R1B6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Trav8d-2Q5R1B6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav8d-2Q5R1B6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav8d-2Q5R1B6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8d-2Q5R1B6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8d-2Q5R1B6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8d-2Q5R1B6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav8d-2Q5R1B6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8d-2Q5R1B6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8d-2Q5R1B6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trav8d-2Q5R1B6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms