Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf20Q5DTM8 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.08■■□□□ 1.61
Rnf20Q5DTM8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
Rnf20Q5DTM8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Rnf20Q5DTM8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf20Q5DTM8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Gm5921-201ENSMUST00000075898 882 ntBASIC25.06■■□□□ 1.6
Rnf20Q5DTM8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.05■■□□□ 1.6
Rnf20Q5DTM8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Rnf20Q5DTM8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf20Q5DTM8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf20Q5DTM8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf20Q5DTM8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf20Q5DTM8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.03■■□□□ 1.6
Rnf20Q5DTM8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf20Q5DTM8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf20Q5DTM8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rnf20Q5DTM8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rnf20Q5DTM8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.99■■□□□ 1.59
Rnf20Q5DTM8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rnf20Q5DTM8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Rnf20Q5DTM8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Gm43566-201ENSMUST00000196851 808 ntBASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf20Q5DTM8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf20Q5DTM8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf20Q5DTM8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rnf20Q5DTM8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rnf20Q5DTM8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rnf20Q5DTM8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rnf20Q5DTM8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms