Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rc3h1Q4VGL6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rc3h1Q4VGL6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rc3h1Q4VGL6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.51■■□□□ 1.51
Rc3h1Q4VGL6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
Rc3h1Q4VGL6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rc3h1Q4VGL6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rc3h1Q4VGL6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Rc3h1Q4VGL6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.5■■□□□ 1.51
Rc3h1Q4VGL6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.49■■□□□ 1.51
Rc3h1Q4VGL6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.49■■□□□ 1.51
Rc3h1Q4VGL6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Rc3h1Q4VGL6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.49■■□□□ 1.51
Rc3h1Q4VGL6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rc3h1Q4VGL6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.47■■□□□ 1.51
Rc3h1Q4VGL6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Rc3h1Q4VGL6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Rc3h1Q4VGL6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.51
Rc3h1Q4VGL6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Gm21956-201ENSMUST00000179946 522 ntBASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
Rc3h1Q4VGL6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rc3h1Q4VGL6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Rc3h1Q4VGL6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rc3h1Q4VGL6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Gm9847-201ENSMUST00000052528 599 ntBASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rc3h1Q4VGL6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rc3h1Q4VGL6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.41■■□□□ 1.5
Rc3h1Q4VGL6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rc3h1Q4VGL6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Rc3h1Q4VGL6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rc3h1Q4VGL6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rc3h1Q4VGL6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rc3h1Q4VGL6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rc3h1Q4VGL6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms