Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Herc2Q4U2R1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc2Q4U2R1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Gm9870-201ENSMUST00000063874 645 ntBASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc2Q4U2R1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Gm12527-201ENSMUST00000117967 564 ntBASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc2Q4U2R1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Gm7143-201ENSMUST00000222811 859 ntBASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.04□□□□□ -0.32
Herc2Q4U2R1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Gm40848-201ENSMUST00000221998 324 ntBASIC13.03□□□□□ -0.32
Herc2Q4U2R1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Herc2Q4U2R1 Mir6982-201ENSMUST00000184354 68 ntBASIC13.02□□□□□ -0.33
Herc2Q4U2R1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc2Q4U2R1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Herc2Q4U2R1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc2Q4U2R1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc2Q4U2R1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.02□□□□□ -0.33
Herc2Q4U2R1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Herc2Q4U2R1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13□□□□□ -0.33
Herc2Q4U2R1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Gm6085-201ENSMUST00000182774 1470 ntBASIC13□□□□□ -0.33
Herc2Q4U2R1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13□□□□□ -0.33
Herc2Q4U2R1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13□□□□□ -0.33
Herc2Q4U2R1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Herc2Q4U2R1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Herc2Q4U2R1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms