Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.51■■□□□ 1.99
Uspl1Q3ULM6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.51■■□□□ 1.99
Uspl1Q3ULM6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC27.51■■□□□ 1.99
Uspl1Q3ULM6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC27.5■■□□□ 1.99
Uspl1Q3ULM6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Uspl1Q3ULM6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Uspl1Q3ULM6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
Uspl1Q3ULM6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Uspl1Q3ULM6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Gm43403-201ENSMUST00000198011 1786 ntBASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.48■■□□□ 1.99
Uspl1Q3ULM6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 Gm10620-201ENSMUST00000098379 1332 ntBASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 Gm15820-201ENSMUST00000201566 728 ntBASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC27.47■■□□□ 1.99
Uspl1Q3ULM6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Uspl1Q3ULM6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Uspl1Q3ULM6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Uspl1Q3ULM6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Uspl1Q3ULM6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Uspl1Q3ULM6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Uspl1Q3ULM6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Uspl1Q3ULM6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Uspl1Q3ULM6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC27.45■■□□□ 1.98
Uspl1Q3ULM6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Uspl1Q3ULM6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.45■■□□□ 1.98
Uspl1Q3ULM6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC27.44■■□□□ 1.98
Uspl1Q3ULM6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Uspl1Q3ULM6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Uspl1Q3ULM6 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.44■■□□□ 1.98
Uspl1Q3ULM6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Uspl1Q3ULM6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Uspl1Q3ULM6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Uspl1Q3ULM6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Uspl1Q3ULM6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Uspl1Q3ULM6 Gm10399-202ENSMUST00000202768 748 ntBASIC27.42■■□□□ 1.98
Uspl1Q3ULM6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Uspl1Q3ULM6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Uspl1Q3ULM6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Uspl1Q3ULM6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Uspl1Q3ULM6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Uspl1Q3ULM6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Uspl1Q3ULM6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Gm5131-201ENSMUST00000212776 1238 ntBASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Uspl1Q3ULM6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Uspl1Q3ULM6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Uspl1Q3ULM6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Uspl1Q3ULM6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.38■■□□□ 1.97
Uspl1Q3ULM6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC27.38■■□□□ 1.97
Uspl1Q3ULM6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Uspl1Q3ULM6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Uspl1Q3ULM6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Gm13042-201ENSMUST00000119244 1955 ntBASIC27.37■■□□□ 1.97
Uspl1Q3ULM6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Uspl1Q3ULM6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Uspl1Q3ULM6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Uspl1Q3ULM6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Uspl1Q3ULM6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Uspl1Q3ULM6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Uspl1Q3ULM6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Uspl1Q3ULM6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Uspl1Q3ULM6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Uspl1Q3ULM6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Uspl1Q3ULM6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Uspl1Q3ULM6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Uspl1Q3ULM6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms