Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11110Q3U4K9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.98■□□□□ 0.47
Gm11110Q3U4K9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11110Q3U4K9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.96■□□□□ 0.47
Gm11110Q3U4K9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11110Q3U4K9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11110Q3U4K9 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.93■□□□□ 0.46
Gm11110Q3U4K9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Gm45444-201ENSMUST00000211394 898 ntBASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Gm11110Q3U4K9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm11110Q3U4K9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11110Q3U4K9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 472.2 ms