Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shcbp1lQ3TTP0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Shcbp1lQ3TTP0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shcbp1lQ3TTP0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Shcbp1lQ3TTP0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Shcbp1lQ3TTP0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Shcbp1lQ3TTP0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Shcbp1lQ3TTP0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shcbp1lQ3TTP0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Shcbp1lQ3TTP0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Shcbp1lQ3TTP0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shcbp1lQ3TTP0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Shcbp1lQ3TTP0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.11■□□□□ 0.97
Shcbp1lQ3TTP0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 Gm22238-201ENSMUST00000175222 88 ntBASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shcbp1lQ3TTP0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Shcbp1lQ3TTP0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shcbp1lQ3TTP0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shcbp1lQ3TTP0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shcbp1lQ3TTP0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shcbp1lQ3TTP0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Shcbp1lQ3TTP0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shcbp1lQ3TTP0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Shcbp1lQ3TTP0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms