Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hddc2Q3SXD3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hddc2Q3SXD3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hddc2Q3SXD3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hddc2Q3SXD3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hddc2Q3SXD3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hddc2Q3SXD3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hddc2Q3SXD3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hddc2Q3SXD3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hddc2Q3SXD3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hddc2Q3SXD3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hddc2Q3SXD3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hddc2Q3SXD3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hddc2Q3SXD3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hddc2Q3SXD3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hddc2Q3SXD3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Hddc2Q3SXD3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hddc2Q3SXD3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hddc2Q3SXD3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hddc2Q3SXD3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hddc2Q3SXD3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hddc2Q3SXD3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hddc2Q3SXD3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hddc2Q3SXD3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hddc2Q3SXD3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hddc2Q3SXD3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Hddc2Q3SXD3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hddc2Q3SXD3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hddc2Q3SXD3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hddc2Q3SXD3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.27■□□□□ 0.68
Hddc2Q3SXD3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms