Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf6P70196 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf6P70196 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf6P70196 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Traf6P70196 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Traf6P70196 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf6P70196 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf6P70196 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf6P70196 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.63■□□□□ 0.89
Traf6P70196 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf6P70196 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf6P70196 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.63■□□□□ 0.89
Traf6P70196 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Traf6P70196 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Traf6P70196 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.62■□□□□ 0.89
Traf6P70196 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.62■□□□□ 0.89
Traf6P70196 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Traf6P70196 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.62■□□□□ 0.89
Traf6P70196 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf6P70196 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf6P70196 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf6P70196 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf6P70196 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.61■□□□□ 0.89
Traf6P70196 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.61■□□□□ 0.89
Traf6P70196 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf6P70196 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf6P70196 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf6P70196 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.6■□□□□ 0.89
Traf6P70196 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.6■□□□□ 0.89
Traf6P70196 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf6P70196 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf6P70196 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf6P70196 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Traf6P70196 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf6P70196 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Traf6P70196 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Traf6P70196 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Traf6P70196 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Traf6P70196 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.58■□□□□ 0.89
Traf6P70196 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Traf6P70196 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Traf6P70196 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf6P70196 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf6P70196 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Traf6P70196 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf6P70196 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Traf6P70196 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Traf6P70196 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf6P70196 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Traf6P70196 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf6P70196 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Traf6P70196 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.56■□□□□ 0.88
Traf6P70196 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf6P70196 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.56■□□□□ 0.88
Traf6P70196 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf6P70196 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.56■□□□□ 0.88
Traf6P70196 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Traf6P70196 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.56■□□□□ 0.88
Traf6P70196 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Traf6P70196 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Traf6P70196 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.55■□□□□ 0.88
Traf6P70196 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Traf6P70196 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.55■□□□□ 0.88
Traf6P70196 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf6P70196 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf6P70196 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf6P70196 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf6P70196 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.54■□□□□ 0.88
Traf6P70196 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf6P70196 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.54■□□□□ 0.88
Traf6P70196 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Traf6P70196 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms