Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ybx1P62960 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
Ybx1P62960 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ybx1P62960 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ybx1P62960 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ybx1P62960 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ybx1P62960 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ybx1P62960 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ybx1P62960 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ybx1P62960 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ybx1P62960 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ybx1P62960 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ybx1P62960 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ybx1P62960 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ybx1P62960 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ybx1P62960 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ybx1P62960 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.72■■□□□ 1.07
Ybx1P62960 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.72■■□□□ 1.07
Ybx1P62960 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ybx1P62960 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ybx1P62960 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ybx1P62960 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ybx1P62960 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ybx1P62960 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ybx1P62960 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ybx1P62960 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ybx1P62960 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ybx1P62960 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ybx1P62960 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ybx1P62960 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ybx1P62960 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ybx1P62960 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ybx1P62960 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ybx1P62960 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ybx1P62960 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ybx1P62960 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ybx1P62960 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ybx1P62960 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.68■■□□□ 1.06
Ybx1P62960 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ybx1P62960 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ybx1P62960 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ybx1P62960 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Ybx1P62960 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.67■■□□□ 1.06
Ybx1P62960 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.66■■□□□ 1.06
Ybx1P62960 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.66■■□□□ 1.06
Ybx1P62960 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ybx1P62960 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Ybx1P62960 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Ybx1P62960 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.65■■□□□ 1.06
Ybx1P62960 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ybx1P62960 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ybx1P62960 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ybx1P62960 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ybx1P62960 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.64■■□□□ 1.05
Ybx1P62960 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.64■■□□□ 1.05
Ybx1P62960 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ybx1P62960 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ybx1P62960 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Ybx1P62960 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ybx1P62960 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ybx1P62960 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ybx1P62960 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Ybx1P62960 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ybx1P62960 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ybx1P62960 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ybx1P62960 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ybx1P62960 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ybx1P62960 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ybx1P62960 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.62■■□□□ 1.05
Ybx1P62960 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ybx1P62960 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ybx1P62960 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.61■■□□□ 1.05
Ybx1P62960 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ybx1P62960 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ybx1P62960 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ybx1P62960 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms