Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.47■□□□□ 0.39
Lsm5P62322 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm5P62322 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Lsm5P62322 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm5P62322 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm5P62322 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lsm5P62322 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm5P62322 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm5P62322 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Lsm5P62322 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.45■□□□□ 0.38
Lsm5P62322 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm5P62322 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm5P62322 Iqck-206ENSMUST00000208658 2891 ntBASIC17.45■□□□□ 0.38
Lsm5P62322 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.45■□□□□ 0.38
Lsm5P62322 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm5P62322 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm5P62322 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.44■□□□□ 0.38
Lsm5P62322 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.44■□□□□ 0.38
Lsm5P62322 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Gm4799-201ENSMUST00000095396 657 ntBASIC17.44■□□□□ 0.38
Lsm5P62322 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm5P62322 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Lsm5P62322 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lsm5P62322 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm5P62322 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm5P62322 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm5P62322 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.42■□□□□ 0.38
Lsm5P62322 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm5P62322 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
Lsm5P62322 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lsm5P62322 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lsm5P62322 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lsm5P62322 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.41■□□□□ 0.38
Lsm5P62322 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.41■□□□□ 0.38
Lsm5P62322 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm5P62322 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lsm5P62322 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.4■□□□□ 0.38
Lsm5P62322 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lsm5P62322 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm5P62322 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lsm5P62322 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm5P62322 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm5P62322 Gm9812-201ENSMUST00000061934 968 ntBASIC17.39■□□□□ 0.37
Lsm5P62322 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Lsm5P62322 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm5P62322 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm5P62322 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
Lsm5P62322 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Lsm5P62322 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm5P62322 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.38■□□□□ 0.37
Lsm5P62322 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Lsm5P62322 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm5P62322 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm5P62322 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Terc-201ENSMUST00000082862 423 ntBASIC17.37■□□□□ 0.37
Lsm5P62322 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm5P62322 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.37■□□□□ 0.37
Lsm5P62322 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms