Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.91■□□□□ 0.78
Nup43P59235 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nup43P59235 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.9■□□□□ 0.78
Nup43P59235 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup43P59235 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.9■□□□□ 0.78
Nup43P59235 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.9■□□□□ 0.78
Nup43P59235 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup43P59235 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup43P59235 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup43P59235 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup43P59235 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Nup43P59235 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup43P59235 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup43P59235 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup43P59235 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nup43P59235 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup43P59235 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup43P59235 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nup43P59235 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup43P59235 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup43P59235 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup43P59235 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup43P59235 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup43P59235 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.87■□□□□ 0.77
Nup43P59235 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nup43P59235 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup43P59235 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup43P59235 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Nup43P59235 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup43P59235 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nup43P59235 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup43P59235 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup43P59235 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup43P59235 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup43P59235 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.85■□□□□ 0.77
Nup43P59235 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.85■□□□□ 0.77
Nup43P59235 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nup43P59235 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup43P59235 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nup43P59235 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.84■□□□□ 0.77
Nup43P59235 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.84■□□□□ 0.77
Nup43P59235 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.84■□□□□ 0.77
Nup43P59235 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup43P59235 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup43P59235 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nup43P59235 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup43P59235 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup43P59235 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Nup43P59235 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Nup43P59235 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup43P59235 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nup43P59235 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.81■□□□□ 0.76
Nup43P59235 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.81■□□□□ 0.76
Nup43P59235 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.81■□□□□ 0.76
Nup43P59235 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup43P59235 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nup43P59235 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup43P59235 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.8■□□□□ 0.76
Nup43P59235 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
Nup43P59235 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup43P59235 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Nup43P59235 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup43P59235 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Gm10399-202ENSMUST00000202768 748 ntBASIC19.79■□□□□ 0.76
Nup43P59235 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nup43P59235 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nup43P59235 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup43P59235 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms