Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.69■□□□□ 0.9
Lbx1P52955 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.69■□□□□ 0.9
Lbx1P52955 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lbx1P52955 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lbx1P52955 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lbx1P52955 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lbx1P52955 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lbx1P52955 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lbx1P52955 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lbx1P52955 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Lbx1P52955 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.67■□□□□ 0.9
Lbx1P52955 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lbx1P52955 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lbx1P52955 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.66■□□□□ 0.9
Lbx1P52955 Gm10033-202ENSMUST00000211874 928 ntBASIC20.66■□□□□ 0.9
Lbx1P52955 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.66■□□□□ 0.9
Lbx1P52955 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lbx1P52955 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
Lbx1P52955 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lbx1P52955 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lbx1P52955 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lbx1P52955 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lbx1P52955 Amer2-203ENSMUST00000225247 2662 ntBASIC20.65■□□□□ 0.9
Lbx1P52955 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lbx1P52955 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lbx1P52955 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lbx1P52955 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lbx1P52955 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lbx1P52955 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lbx1P52955 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lbx1P52955 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lbx1P52955 Gm12251-201ENSMUST00000117893 792 ntBASIC20.63■□□□□ 0.89
Lbx1P52955 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lbx1P52955 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lbx1P52955 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.62■□□□□ 0.89
Lbx1P52955 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lbx1P52955 Gm12933-201ENSMUST00000120203 872 ntBASIC20.62■□□□□ 0.89
Lbx1P52955 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.62■□□□□ 0.89
Lbx1P52955 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.62■□□□□ 0.89
Lbx1P52955 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lbx1P52955 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lbx1P52955 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lbx1P52955 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lbx1P52955 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.62■□□□□ 0.89
Lbx1P52955 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lbx1P52955 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lbx1P52955 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.61■□□□□ 0.89
Lbx1P52955 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.61■□□□□ 0.89
Lbx1P52955 Gm9870-201ENSMUST00000063874 645 ntBASIC20.61■□□□□ 0.89
Lbx1P52955 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lbx1P52955 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lbx1P52955 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lbx1P52955 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lbx1P52955 Gm7143-201ENSMUST00000222811 859 ntBASIC20.6■□□□□ 0.89
Lbx1P52955 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lbx1P52955 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lbx1P52955 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lbx1P52955 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.59■□□□□ 0.89
Lbx1P52955 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.59■□□□□ 0.89
Lbx1P52955 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Lbx1P52955 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.59■□□□□ 0.89
Lbx1P52955 Gm40848-201ENSMUST00000221998 324 ntBASIC20.59■□□□□ 0.89
Lbx1P52955 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lbx1P52955 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lbx1P52955 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lbx1P52955 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lbx1P52955 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.58■□□□□ 0.89
Lbx1P52955 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lbx1P52955 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lbx1P52955 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lbx1P52955 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Lbx1P52955 Gm42778-201ENSMUST00000199644 553 ntBASIC20.57■□□□□ 0.88
Lbx1P52955 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.57■□□□□ 0.88
Lbx1P52955 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Lbx1P52955 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lbx1P52955 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lbx1P52955 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lbx1P52955 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.57■□□□□ 0.88
Lbx1P52955 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.57■□□□□ 0.88
Lbx1P52955 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lbx1P52955 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lbx1P52955 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lbx1P52955 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lbx1P52955 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.56■□□□□ 0.88
Lbx1P52955 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lbx1P52955 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lbx1P52955 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lbx1P52955 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lbx1P52955 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lbx1P52955 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lbx1P52955 Gm12441-201ENSMUST00000121806 588 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms