Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.36■□□□□ 0.37
Abca1P41233 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Abca1P41233 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Abca1P41233 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Abca1P41233 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Abca1P41233 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abca1P41233 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca1P41233 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca1P41233 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abca1P41233 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.34■□□□□ 0.37
Abca1P41233 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Abca1P41233 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Abca1P41233 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Abca1P41233 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abca1P41233 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abca1P41233 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Abca1P41233 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca1P41233 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.33■□□□□ 0.36
Abca1P41233 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Abca1P41233 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca1P41233 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.32■□□□□ 0.36
Abca1P41233 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Abca1P41233 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca1P41233 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Abca1P41233 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Abca1P41233 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca1P41233 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.31■□□□□ 0.36
Abca1P41233 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca1P41233 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Abca1P41233 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.31■□□□□ 0.36
Abca1P41233 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca1P41233 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Abca1P41233 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.31■□□□□ 0.36
Abca1P41233 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Abca1P41233 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca1P41233 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca1P41233 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca1P41233 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca1P41233 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca1P41233 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca1P41233 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.3■□□□□ 0.36
Abca1P41233 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Abca1P41233 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca1P41233 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca1P41233 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca1P41233 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abca1P41233 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.29■□□□□ 0.36
Abca1P41233 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.28■□□□□ 0.36
Abca1P41233 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Abca1P41233 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Abca1P41233 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.28■□□□□ 0.36
Abca1P41233 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.28■□□□□ 0.36
Abca1P41233 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Abca1P41233 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.28■□□□□ 0.36
Abca1P41233 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.28■□□□□ 0.36
Abca1P41233 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Abca1P41233 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.28■□□□□ 0.36
Abca1P41233 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca1P41233 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Abca1P41233 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca1P41233 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca1P41233 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca1P41233 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca1P41233 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.27■□□□□ 0.35
Abca1P41233 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.27■□□□□ 0.35
Abca1P41233 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca1P41233 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca1P41233 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca1P41233 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca1P41233 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Abca1P41233 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abca1P41233 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms