Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cd9P40240 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cd9P40240 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.93■□□□□ 0.94
Cd9P40240 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.93■□□□□ 0.94
Cd9P40240 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd9P40240 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd9P40240 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd9P40240 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Gm13238-201ENSMUST00000117655 780 ntBASIC20.92■□□□□ 0.94
Cd9P40240 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd9P40240 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cd9P40240 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd9P40240 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.91■□□□□ 0.94
Cd9P40240 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd9P40240 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd9P40240 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd9P40240 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd9P40240 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cd9P40240 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd9P40240 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.9■□□□□ 0.94
Cd9P40240 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd9P40240 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cd9P40240 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.9■□□□□ 0.94
Cd9P40240 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.9■□□□□ 0.94
Cd9P40240 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd9P40240 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.89■□□□□ 0.94
Cd9P40240 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd9P40240 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cd9P40240 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cd9P40240 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd9P40240 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd9P40240 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cd9P40240 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd9P40240 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cd9P40240 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Cd9P40240 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd9P40240 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd9P40240 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cd9P40240 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd9P40240 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.88■□□□□ 0.93
Cd9P40240 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd9P40240 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd9P40240 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd9P40240 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.87■□□□□ 0.93
Cd9P40240 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cd9P40240 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd9P40240 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cd9P40240 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.86■□□□□ 0.93
Cd9P40240 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd9P40240 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd9P40240 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cd9P40240 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cd9P40240 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd9P40240 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.85■□□□□ 0.93
Cd9P40240 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd9P40240 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.84■□□□□ 0.93
Cd9P40240 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cd9P40240 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.84■□□□□ 0.93
Cd9P40240 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Cd9P40240 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd9P40240 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd9P40240 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd9P40240 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd9P40240 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd9P40240 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cd9P40240 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd9P40240 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd9P40240 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd9P40240 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cd9P40240 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd9P40240 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd9P40240 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd9P40240 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.82■□□□□ 0.92
Cd9P40240 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd9P40240 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.82■□□□□ 0.92
Cd9P40240 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd9P40240 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd9P40240 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.81■□□□□ 0.92
Cd9P40240 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Cd9P40240 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd9P40240 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd9P40240 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd9P40240 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd9P40240 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
Cd9P40240 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd9P40240 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.8■□□□□ 0.92
Cd9P40240 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd9P40240 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd9P40240 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms