Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nedd8P29595 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Nedd8P29595 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nedd8P29595 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nedd8P29595 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nedd8P29595 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nedd8P29595 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nedd8P29595 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nedd8P29595 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nedd8P29595 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nedd8P29595 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nedd8P29595 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd8P29595 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.39■□□□□ 0.69
Nedd8P29595 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd8P29595 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nedd8P29595 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.39■□□□□ 0.69
Nedd8P29595 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd8P29595 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd8P29595 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Nedd8P29595 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nedd8P29595 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd8P29595 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd8P29595 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.37■□□□□ 0.69
Nedd8P29595 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd8P29595 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.36■□□□□ 0.69
Nedd8P29595 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.36■□□□□ 0.69
Nedd8P29595 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nedd8P29595 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd8P29595 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.35■□□□□ 0.69
Nedd8P29595 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nedd8P29595 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.35■□□□□ 0.69
Nedd8P29595 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd8P29595 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nedd8P29595 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nedd8P29595 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd8P29595 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd8P29595 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd8P29595 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd8P29595 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Nedd8P29595 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nedd8P29595 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nedd8P29595 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.34■□□□□ 0.69
Nedd8P29595 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.34■□□□□ 0.69
Nedd8P29595 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.33■□□□□ 0.69
Nedd8P29595 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nedd8P29595 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nedd8P29595 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nedd8P29595 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nedd8P29595 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nedd8P29595 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nedd8P29595 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nedd8P29595 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.32■□□□□ 0.68
Nedd8P29595 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
Nedd8P29595 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nedd8P29595 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nedd8P29595 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
Nedd8P29595 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nedd8P29595 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nedd8P29595 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nedd8P29595 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nedd8P29595 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nedd8P29595 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nedd8P29595 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
Nedd8P29595 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms