Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.94■□□□□ 0.94
Nckap1P28660 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Nckap1P28660 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.94■□□□□ 0.94
Nckap1P28660 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nckap1P28660 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nckap1P28660 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nckap1P28660 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nckap1P28660 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.93■□□□□ 0.94
Nckap1P28660 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.93■□□□□ 0.94
Nckap1P28660 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nckap1P28660 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1P28660 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1P28660 Gm21956-201ENSMUST00000179946 522 ntBASIC20.92■□□□□ 0.94
Nckap1P28660 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.92■□□□□ 0.94
Nckap1P28660 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1P28660 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Nckap1P28660 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1P28660 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nckap1P28660 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nckap1P28660 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Nckap1P28660 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nckap1P28660 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nckap1P28660 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nckap1P28660 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nckap1P28660 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nckap1P28660 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.9■□□□□ 0.94
Nckap1P28660 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nckap1P28660 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.89■□□□□ 0.94
Nckap1P28660 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.89■□□□□ 0.93
Nckap1P28660 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Nckap1P28660 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nckap1P28660 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nckap1P28660 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nckap1P28660 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nckap1P28660 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.88■□□□□ 0.93
Nckap1P28660 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.88■□□□□ 0.93
Nckap1P28660 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nckap1P28660 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.87■□□□□ 0.93
Nckap1P28660 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.87■□□□□ 0.93
Nckap1P28660 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.87■□□□□ 0.93
Nckap1P28660 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.87■□□□□ 0.93
Nckap1P28660 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.87■□□□□ 0.93
Nckap1P28660 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nckap1P28660 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Nckap1P28660 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Nckap1P28660 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nckap1P28660 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nckap1P28660 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.86■□□□□ 0.93
Nckap1P28660 Gm12821-201ENSMUST00000120022 600 ntBASIC20.86■□□□□ 0.93
Nckap1P28660 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.86■□□□□ 0.93
Nckap1P28660 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nckap1P28660 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.86■□□□□ 0.93
Nckap1P28660 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nckap1P28660 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nckap1P28660 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.85■□□□□ 0.93
Nckap1P28660 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nckap1P28660 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.85■□□□□ 0.93
Nckap1P28660 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.85■□□□□ 0.93
Nckap1P28660 Golgb1-201ENSMUST00000023534 498 ntBASIC20.85■□□□□ 0.93
Nckap1P28660 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nckap1P28660 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nckap1P28660 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nckap1P28660 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.84■□□□□ 0.93
Nckap1P28660 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.84■□□□□ 0.93
Nckap1P28660 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nckap1P28660 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nckap1P28660 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nckap1P28660 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nckap1P28660 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nckap1P28660 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nckap1P28660 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nckap1P28660 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nckap1P28660 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nckap1P28660 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nckap1P28660 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nckap1P28660 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nckap1P28660 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nckap1P28660 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nckap1P28660 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nckap1P28660 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.81■□□□□ 0.92
Nckap1P28660 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Nckap1P28660 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms