Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nfkb1P25799 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Nfkb1P25799 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.63■■□□□ 1.05
Nfkb1P25799 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 Gm13241-201ENSMUST00000094493 780 ntBASIC21.63■■□□□ 1.05
Nfkb1P25799 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nfkb1P25799 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nfkb1P25799 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nfkb1P25799 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Nfkb1P25799 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
Nfkb1P25799 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nfkb1P25799 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nfkb1P25799 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.61■■□□□ 1.05
Nfkb1P25799 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.61■■□□□ 1.05
Nfkb1P25799 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nfkb1P25799 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.6■■□□□ 1.05
Nfkb1P25799 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nfkb1P25799 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nfkb1P25799 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.59■■□□□ 1.05
Nfkb1P25799 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Nfkb1P25799 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nfkb1P25799 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
Nfkb1P25799 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nfkb1P25799 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nfkb1P25799 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.59■■□□□ 1.05
Nfkb1P25799 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nfkb1P25799 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 Gm21956-201ENSMUST00000179946 522 ntBASIC21.58■■□□□ 1.05
Nfkb1P25799 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.58■■□□□ 1.05
Nfkb1P25799 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nfkb1P25799 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nfkb1P25799 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nfkb1P25799 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
Nfkb1P25799 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nfkb1P25799 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.57■■□□□ 1.04
Nfkb1P25799 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nfkb1P25799 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nfkb1P25799 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nfkb1P25799 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.56■■□□□ 1.04
Nfkb1P25799 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nfkb1P25799 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.56■■□□□ 1.04
Nfkb1P25799 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nfkb1P25799 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nfkb1P25799 Gm12922-201ENSMUST00000120626 809 ntBASIC21.55■■□□□ 1.04
Nfkb1P25799 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Nfkb1P25799 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nfkb1P25799 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nfkb1P25799 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.54■■□□□ 1.04
Nfkb1P25799 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.54■■□□□ 1.04
Nfkb1P25799 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nfkb1P25799 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nfkb1P25799 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nfkb1P25799 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nfkb1P25799 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Nfkb1P25799 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nfkb1P25799 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.53■■□□□ 1.04
Nfkb1P25799 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nfkb1P25799 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nfkb1P25799 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.53■■□□□ 1.04
Nfkb1P25799 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Nfkb1P25799 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.52■■□□□ 1.04
Nfkb1P25799 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nfkb1P25799 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
Nfkb1P25799 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Nfkb1P25799 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nfkb1P25799 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.52■■□□□ 1.03
Nfkb1P25799 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.51■■□□□ 1.03
Nfkb1P25799 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nfkb1P25799 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nfkb1P25799 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nfkb1P25799 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nfkb1P25799 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 194.7 ms