Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.25■□□□□ 0.67
Cdh3P10287 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh3P10287 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdh3P10287 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cdh3P10287 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh3P10287 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdh3P10287 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdh3P10287 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh3P10287 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cdh3P10287 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdh3P10287 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdh3P10287 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh3P10287 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh3P10287 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdh3P10287 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdh3P10287 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh3P10287 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh3P10287 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdh3P10287 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh3P10287 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cdh3P10287 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdh3P10287 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh3P10287 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cdh3P10287 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh3P10287 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh3P10287 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.2■□□□□ 0.66
Cdh3P10287 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdh3P10287 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh3P10287 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh3P10287 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh3P10287 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdh3P10287 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh3P10287 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh3P10287 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh3P10287 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.19■□□□□ 0.66
Cdh3P10287 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdh3P10287 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh3P10287 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh3P10287 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdh3P10287 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.19■□□□□ 0.66
Cdh3P10287 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh3P10287 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cdh3P10287 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh3P10287 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cdh3P10287 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh3P10287 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh3P10287 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh3P10287 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh3P10287 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh3P10287 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh3P10287 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Cdh3P10287 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdh3P10287 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.15■□□□□ 0.66
Cdh3P10287 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh3P10287 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.15■□□□□ 0.66
Cdh3P10287 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Cdh3P10287 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh3P10287 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cdh3P10287 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh3P10287 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh3P10287 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh3P10287 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh3P10287 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms