Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ApoeP08226 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ApoeP08226 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ApoeP08226 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
ApoeP08226 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ApoeP08226 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ApoeP08226 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ApoeP08226 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ApoeP08226 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ApoeP08226 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ApoeP08226 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ApoeP08226 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ApoeP08226 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ApoeP08226 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.85■□□□□ 0.77
ApoeP08226 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ApoeP08226 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.84■□□□□ 0.77
ApoeP08226 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.84■□□□□ 0.77
ApoeP08226 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.84■□□□□ 0.77
ApoeP08226 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ApoeP08226 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ApoeP08226 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ApoeP08226 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ApoeP08226 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ApoeP08226 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ApoeP08226 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ApoeP08226 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ApoeP08226 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.82■□□□□ 0.76
ApoeP08226 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.82■□□□□ 0.76
ApoeP08226 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
ApoeP08226 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.82■□□□□ 0.76
ApoeP08226 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ApoeP08226 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ApoeP08226 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ApoeP08226 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ApoeP08226 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.81■□□□□ 0.76
ApoeP08226 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ApoeP08226 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ApoeP08226 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ApoeP08226 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ApoeP08226 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ApoeP08226 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ApoeP08226 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.79■□□□□ 0.76
ApoeP08226 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ApoeP08226 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.79■□□□□ 0.76
ApoeP08226 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ApoeP08226 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ApoeP08226 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ApoeP08226 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ApoeP08226 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ApoeP08226 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ApoeP08226 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.78■□□□□ 0.76
ApoeP08226 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ApoeP08226 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ApoeP08226 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ApoeP08226 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ApoeP08226 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ApoeP08226 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.77■□□□□ 0.76
ApoeP08226 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ApoeP08226 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ApoeP08226 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.77■□□□□ 0.76
ApoeP08226 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ApoeP08226 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.77■□□□□ 0.76
ApoeP08226 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.77■□□□□ 0.76
ApoeP08226 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ApoeP08226 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ApoeP08226 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ApoeP08226 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms