Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm43566-201ENSMUST00000196851 808 ntBASIC21.28■■□□□ 1
PdgfrbP05622 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
PdgfrbP05622 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.28■■□□□ 1
PdgfrbP05622 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PdgfrbP05622 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PdgfrbP05622 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.28■■□□□ 1
PdgfrbP05622 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.28■■□□□ 1
PdgfrbP05622 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PdgfrbP05622 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PdgfrbP05622 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.27■■□□□ 1
PdgfrbP05622 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PdgfrbP05622 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PdgfrbP05622 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PdgfrbP05622 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.26■□□□□ 0.99
PdgfrbP05622 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.26■□□□□ 0.99
PdgfrbP05622 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
PdgfrbP05622 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.26■□□□□ 0.99
PdgfrbP05622 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PdgfrbP05622 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PdgfrbP05622 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PdgfrbP05622 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PdgfrbP05622 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PdgfrbP05622 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PdgfrbP05622 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PdgfrbP05622 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PdgfrbP05622 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PdgfrbP05622 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PdgfrbP05622 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PdgfrbP05622 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PdgfrbP05622 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PdgfrbP05622 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PdgfrbP05622 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PdgfrbP05622 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PdgfrbP05622 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PdgfrbP05622 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PdgfrbP05622 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.23■□□□□ 0.99
PdgfrbP05622 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PdgfrbP05622 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PdgfrbP05622 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PdgfrbP05622 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PdgfrbP05622 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PdgfrbP05622 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrbP05622 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrbP05622 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrbP05622 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrbP05622 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrbP05622 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrbP05622 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PdgfrbP05622 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PdgfrbP05622 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrbP05622 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.19■□□□□ 0.98
PdgfrbP05622 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PdgfrbP05622 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PdgfrbP05622 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PdgfrbP05622 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.18■□□□□ 0.98
PdgfrbP05622 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PdgfrbP05622 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrbP05622 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.17■□□□□ 0.98
PdgfrbP05622 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrbP05622 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrbP05622 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.17■□□□□ 0.98
PdgfrbP05622 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrbP05622 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrbP05622 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PdgfrbP05622 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PdgfrbP05622 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrbP05622 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.15■□□□□ 0.98
PdgfrbP05622 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.15■□□□□ 0.98
PdgfrbP05622 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrbP05622 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrbP05622 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms