Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
P04945 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
P04945 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
P04945 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
P04945 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
P04945 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04945 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.11■□□□□ 0.49
P04945 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04945 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.11■□□□□ 0.49
P04945 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
P04945 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.1■□□□□ 0.49
P04945 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04945 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
P04945 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
P04945 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.09■□□□□ 0.49
P04945 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.09■□□□□ 0.49
P04945 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.09■□□□□ 0.49
P04945 Gm45444-201ENSMUST00000211394 898 ntBASIC18.09■□□□□ 0.49
P04945 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.09■□□□□ 0.49
P04945 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04945 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.08■□□□□ 0.48
P04945 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
P04945 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.08■□□□□ 0.48
P04945 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.08■□□□□ 0.48
P04945 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
P04945 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04945 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P04945 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04945 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.07■□□□□ 0.48
P04945 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04945 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
P04945 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
P04945 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
P04945 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P04945 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.06■□□□□ 0.48
P04945 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.06■□□□□ 0.48
P04945 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04945 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.05■□□□□ 0.48
P04945 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.05■□□□□ 0.48
P04945 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.05■□□□□ 0.48
P04945 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.05■□□□□ 0.48
P04945 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
P04945 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04945 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.05■□□□□ 0.48
P04945 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.04■□□□□ 0.48
P04945 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P04945 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.04■□□□□ 0.48
P04945 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04945 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04945 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04945 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04945 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.03■□□□□ 0.48
P04945 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04945 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04945 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.03■□□□□ 0.48
P04945 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04945 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04945 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms