Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Becn1O88597 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Becn1O88597 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Becn1O88597 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Becn1O88597 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Becn1O88597 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Becn1O88597 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
Becn1O88597 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.84■■□□□ 1.41
Becn1O88597 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.84■■□□□ 1.41
Becn1O88597 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Becn1O88597 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Becn1O88597 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Becn1O88597 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Becn1O88597 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.83■■□□□ 1.41
Becn1O88597 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.83■■□□□ 1.41
Becn1O88597 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Becn1O88597 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Becn1O88597 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Becn1O88597 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.82■■□□□ 1.4
Becn1O88597 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Becn1O88597 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Becn1O88597 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Becn1O88597 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Becn1O88597 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Becn1O88597 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Becn1O88597 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Becn1O88597 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Becn1O88597 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Becn1O88597 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Becn1O88597 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Becn1O88597 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Becn1O88597 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Becn1O88597 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Becn1O88597 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Becn1O88597 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 Gm45364-201ENSMUST00000210883 159 ntBASIC23.78■■□□□ 1.4
Becn1O88597 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Becn1O88597 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Becn1O88597 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Becn1O88597 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Becn1O88597 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Becn1O88597 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.76■■□□□ 1.39
Becn1O88597 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.76■■□□□ 1.39
Becn1O88597 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.76■■□□□ 1.39
Becn1O88597 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Becn1O88597 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Becn1O88597 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Becn1O88597 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Becn1O88597 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Becn1O88597 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Becn1O88597 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Becn1O88597 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Becn1O88597 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.74■■□□□ 1.39
Becn1O88597 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Becn1O88597 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Becn1O88597 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.73■■□□□ 1.39
Becn1O88597 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.72■■□□□ 1.39
Becn1O88597 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Becn1O88597 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Becn1O88597 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.71■■□□□ 1.39
Becn1O88597 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Becn1O88597 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Becn1O88597 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.7■■□□□ 1.39
Becn1O88597 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Becn1O88597 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Becn1O88597 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Becn1O88597 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Becn1O88597 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Becn1O88597 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms