Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.32■□□□□ 0.68
Cops4O88544 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cops4O88544 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cops4O88544 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cops4O88544 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cops4O88544 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops4O88544 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cops4O88544 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cops4O88544 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops4O88544 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops4O88544 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops4O88544 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cops4O88544 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cops4O88544 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops4O88544 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cops4O88544 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops4O88544 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
Cops4O88544 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops4O88544 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cops4O88544 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cops4O88544 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.29■□□□□ 0.68
Cops4O88544 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops4O88544 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops4O88544 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops4O88544 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.28■□□□□ 0.68
Cops4O88544 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops4O88544 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops4O88544 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops4O88544 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops4O88544 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops4O88544 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cops4O88544 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops4O88544 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cops4O88544 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops4O88544 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops4O88544 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops4O88544 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cops4O88544 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cops4O88544 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cops4O88544 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.26■□□□□ 0.67
Cops4O88544 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops4O88544 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.25■□□□□ 0.67
Cops4O88544 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
Cops4O88544 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cops4O88544 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Cops4O88544 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops4O88544 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.24■□□□□ 0.67
Cops4O88544 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops4O88544 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops4O88544 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.24■□□□□ 0.67
Cops4O88544 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cops4O88544 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops4O88544 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops4O88544 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.24■□□□□ 0.67
Cops4O88544 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops4O88544 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops4O88544 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops4O88544 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops4O88544 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
Cops4O88544 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.22■□□□□ 0.67
Cops4O88544 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops4O88544 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops4O88544 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops4O88544 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.21■□□□□ 0.67
Cops4O88544 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cops4O88544 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops4O88544 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops4O88544 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops4O88544 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops4O88544 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops4O88544 Scarna2-201ENSMUST00000157560 414 ntBASIC19.2■□□□□ 0.66
Cops4O88544 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cops4O88544 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms