Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan6O70401 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan6O70401 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tspan6O70401 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.62■□□□□ 0.89
Tspan6O70401 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tspan6O70401 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tspan6O70401 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.62■□□□□ 0.89
Tspan6O70401 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tspan6O70401 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tspan6O70401 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan6O70401 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan6O70401 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan6O70401 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan6O70401 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tspan6O70401 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan6O70401 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Tspan6O70401 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.6■□□□□ 0.89
Tspan6O70401 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan6O70401 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.59■□□□□ 0.89
Tspan6O70401 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan6O70401 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
Tspan6O70401 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.58■□□□□ 0.89
Tspan6O70401 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan6O70401 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan6O70401 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tspan6O70401 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan6O70401 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan6O70401 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan6O70401 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan6O70401 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan6O70401 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan6O70401 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan6O70401 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan6O70401 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan6O70401 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan6O70401 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Tspan6O70401 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tspan6O70401 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tspan6O70401 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan6O70401 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan6O70401 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan6O70401 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan6O70401 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.54■□□□□ 0.88
Tspan6O70401 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tspan6O70401 Gm27454-201ENSMUST00000185090 204 ntBASIC20.54■□□□□ 0.88
Tspan6O70401 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan6O70401 Gm9870-201ENSMUST00000063874 645 ntBASIC20.54■□□□□ 0.88
Tspan6O70401 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan6O70401 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan6O70401 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.53■□□□□ 0.88
Tspan6O70401 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan6O70401 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan6O70401 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan6O70401 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan6O70401 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Tspan6O70401 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tspan6O70401 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Tspan6O70401 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan6O70401 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.51■□□□□ 0.87
Tspan6O70401 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Tspan6O70401 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan6O70401 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan6O70401 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan6O70401 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tspan6O70401 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan6O70401 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan6O70401 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan6O70401 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan6O70401 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tspan6O70401 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tspan6O70401 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan6O70401 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan6O70401 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Tspan6O70401 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.49■□□□□ 0.87
Tspan6O70401 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan6O70401 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.49■□□□□ 0.87
Tspan6O70401 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tspan6O70401 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms