Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ldb2O55203 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ldb2O55203 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ldb2O55203 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
Ldb2O55203 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ldb2O55203 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.01■□□□□ 0.95
Ldb2O55203 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Ldb2O55203 Gm16464-201ENSMUST00000117815 1095 ntBASIC21■□□□□ 0.95
Ldb2O55203 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ldb2O55203 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ldb2O55203 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ldb2O55203 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ldb2O55203 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ldb2O55203 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ldb2O55203 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ldb2O55203 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb2O55203 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.98■□□□□ 0.95
Ldb2O55203 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ldb2O55203 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb2O55203 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ldb2O55203 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ldb2O55203 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.97■□□□□ 0.95
Ldb2O55203 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ldb2O55203 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.97■□□□□ 0.95
Ldb2O55203 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ldb2O55203 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ldb2O55203 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ldb2O55203 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ldb2O55203 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb2O55203 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb2O55203 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb2O55203 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb2O55203 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ldb2O55203 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb2O55203 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ldb2O55203 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb2O55203 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Ldb2O55203 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.94■□□□□ 0.94
Ldb2O55203 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb2O55203 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb2O55203 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb2O55203 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.92■□□□□ 0.94
Ldb2O55203 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.92■□□□□ 0.94
Ldb2O55203 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb2O55203 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ldb2O55203 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ldb2O55203 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.91■□□□□ 0.94
Ldb2O55203 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb2O55203 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Ldb2O55203 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb2O55203 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb2O55203 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ldb2O55203 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb2O55203 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ldb2O55203 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ldb2O55203 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.89■□□□□ 0.94
Ldb2O55203 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ldb2O55203 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Ldb2O55203 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb2O55203 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb2O55203 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
Ldb2O55203 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Ldb2O55203 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Ldb2O55203 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms