Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh12O55134 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.02■□□□□ 0.64
Pcdh12O55134 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh12O55134 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh12O55134 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Pcdh12O55134 Gm15546-201ENSMUST00000122095 826 ntBASIC19.01■□□□□ 0.63
Pcdh12O55134 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh12O55134 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh12O55134 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh12O55134 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh12O55134 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19■□□□□ 0.63
Pcdh12O55134 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19■□□□□ 0.63
Pcdh12O55134 Gm5522-201ENSMUST00000189483 1242 ntBASIC19■□□□□ 0.63
Pcdh12O55134 Nsd1-206ENSMUST00000224918 1001 ntBASIC19■□□□□ 0.63
Pcdh12O55134 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh12O55134 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh12O55134 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.99■□□□□ 0.63
Pcdh12O55134 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh12O55134 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh12O55134 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdh12O55134 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh12O55134 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh12O55134 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh12O55134 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh12O55134 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdh12O55134 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh12O55134 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdh12O55134 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Pcdh12O55134 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdh12O55134 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdh12O55134 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdh12O55134 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.98■□□□□ 0.63
Pcdh12O55134 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh12O55134 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdh12O55134 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdh12O55134 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcdh12O55134 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh12O55134 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh12O55134 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh12O55134 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh12O55134 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh12O55134 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh12O55134 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh12O55134 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh12O55134 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh12O55134 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh12O55134 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh12O55134 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdh12O55134 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh12O55134 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdh12O55134 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh12O55134 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh12O55134 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh12O55134 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdh12O55134 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh12O55134 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdh12O55134 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh12O55134 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh12O55134 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.94■□□□□ 0.62
Pcdh12O55134 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdh12O55134 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdh12O55134 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh12O55134 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Pcdh12O55134 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdh12O55134 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdh12O55134 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh12O55134 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh12O55134 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh12O55134 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh12O55134 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh12O55134 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh12O55134 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Pcdh12O55134 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms